Coabundance analysis using SparCC as implemented in fastspar

This implementation is way faster than correlate_spiec_easi_sparcc but requires linux and the external shell command fastspar.

correlate_fastspar(
  data,
  iterations = 50,
  exclude_iterations = 10,
  bootstraps = 200,
  threads = 1
)

Arguments

data	integer matrix of abundance count data. One sample per row and one taxon per column